Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-548c-3p in MUC Ovarian Hendrix Cluster 56 Table contains all genes in the MUC Ovarian Hendrix cluster number 56. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548c-3p 467 ATF3 activating transcription factor 3 [Source:HGNC Symbol;Acc:785] zzz999 1843 DUSP1 dual specificity phosphatase 1 [Source:HGNC Symbol;Acc:3064] zzz999 7639 ZNF85 zinc finger protein 85 [Source:HGNC Symbol;Acc:13160] T 665 BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like [Source:HGNC Symbol;Acc:1085] T 64429 ZDHHC6 zinc finger, DHHC-type containing 6 [Source:HGNC Symbol;Acc:19160] T 51562 MBIP MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:20427] zzz999 10314 LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) [Source:HGNC Symbol;Acc:6508] T 577 BAI3 brain-specific angiogenesis inhibitor 3 [Source:HGNC Symbol;Acc:945] zzz999 2132 EXT2 exostosin 2 [Source:HGNC Symbol;Acc:3513] zzz999 64376 IKZF5 IKAROS family zinc finger 5 (Pegasus) [Source:HGNC Symbol;Acc:14283] zzz999 2695 GIP gastric inhibitory polypeptide [Source:HGNC Symbol;Acc:4270] zzz999 667 DST dystonin [Source:HGNC Symbol;Acc:1090] zzz999 23764 MAFF v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian) [Source:HGNC Symbol;Acc:6780] zzz999 2587 GALR1 galanin receptor 1 [Source:HGNC Symbol;Acc:4132] zzz999 26054 SENP6 SUMO1/sentrin specific peptidase 6 [Source:HGNC Symbol;Acc:20944] T 902 CCNH cyclin H [Source:HGNC Symbol;Acc:1594] zzz999 4616 GADD45B growth arrest and DNA-damage-inducible, beta [Source:HGNC Symbol;Acc:4096] T 7019 TFAM transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741] T 26137 ZBTB20 zinc finger and BTB domain containing 20 [Source:HGNC Symbol;Acc:13503] T 8013 NR4A3 nuclear receptor subfamily 4, group A, member 3 [Source:HGNC Symbol;Acc:7982] P T 7481 WNT11 wingless-type MMTV integration site family, member 11 [Source:HGNC Symbol;Acc:12776] zzz999 6158 RPL28 ribosomal protein L28 [Source:HGNC Symbol;Acc:10330] T 54708 MARCH5 membrane-associated ring finger (C3HC4) 5 [Source:HGNC Symbol;Acc:26025] P T 10776 ARPP19 cAMP-regulated phosphoprotein, 19kDa [Source:HGNC Symbol;Acc:16967] P T 9221 NOLC1 nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:15608] P T 56242 ZNF253 zinc finger protein 253 [Source:HGNC Symbol;Acc:13497] T 7145 TNS1 tensin 1 [Source:HGNC Symbol;Acc:11973] zzz999 26520 TIMM9 translocase of inner mitochondrial membrane 9 homolog (yeast) [Source:HGNC Symbol;Acc:11819] T 729540 RGPD6 RANBP2-like and GRIP domain containing 6 [Source:HGNC Symbol;Acc:32419] zzz999 661 POLR3D polymerase (RNA) III (DNA directed) polypeptide D, 44kDa [Source:HGNC Symbol;Acc:1080] zzz999 6515 SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 [Source:HGNC Symbol;Acc:11007] T 729515 C6orf35 chromosome 6 open reading frame 35 [Source:HGNC Symbol;Acc:17206] T 5054 SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 [Source:HGNC Symbol;Acc:8583] T 7594 ZNF43 zinc finger protein 43 [Source:HGNC Symbol;Acc:13109] T 3475 IFRD1 interferon-related developmental regulator 1 [Source:HGNC Symbol;Acc:5456] P T 5983 RFC3 replication factor C (activator 1) 3, 38kDa [Source:HGNC Symbol;Acc:9971] T 7128 TNFAIP3 tumor necrosis factor, alpha-induced protein 3 [Source:HGNC Symbol;Acc:11896] P T 81565 NDEL1 nudE nuclear distribution gene E homolog (A. nidulans)-like 1 [Source:HGNC Symbol;Acc:17620] zzz999 23306 TMEM194A transmembrane protein 194A [Source:HGNC Symbol;Acc:29001] T 79974 C7orf58 chromosome 7 open reading frame 58 [Source:HGNC Symbol;Acc:26159] T 27295 PDLIM3 PDZ and LIM domain 3 [Source:HGNC Symbol;Acc:20767] zzz999 25823 TPSG1 tryptase gamma 1 [Source:HGNC Symbol;Acc:14134] zzz999 10526 IPO8 importin 8 [Source:HGNC Symbol;Acc:9853] T 56650 CLDND1 claudin domain containing 1 [Source:HGNC Symbol;Acc:1322] T 9310 ZNF235 zinc finger protein 235 [Source:HGNC Symbol;Acc:12866] T 3164 NR4A1 nuclear receptor subfamily 4, group A, member 1 [Source:HGNC Symbol;Acc:7980] zzz999 4601 MXI1 MAX interactor 1 [Source:HGNC Symbol;Acc:7534] T 1519 CTSO cathepsin O [Source:HGNC Symbol;Acc:2542] T 56603 CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1 [Source:HGNC Symbol;Acc:20581] T 6440 SFTPC surfactant protein C [Source:HGNC Symbol;Acc:10802] zzz999 55422 ZNF331 zinc finger protein 331 [Source:HGNC Symbol;Acc:15489] T 2672 GFI1 growth factor independent 1 transcription repressor [Source:HGNC Symbol;Acc:4237] T 10203 CALCRL calcitonin receptor-like [Source:HGNC Symbol;Acc:16709] P T 284 ANGPT1 angiopoietin 1 [Source:HGNC Symbol;Acc:484] T 10114 HIPK3 homeodomain interacting protein kinase 3 [Source:HGNC Symbol;Acc:4915] P T 2042 EPHA3 EPH receptor A3 [Source:HGNC Symbol;Acc:3387] T 6840 SVIL supervillin [Source:HGNC Symbol;Acc:11480] zzz999 54541 DDIT4 DNA-damage-inducible transcript 4 [Source:HGNC Symbol;Acc:24944] zzz999 7700 ZNF141 zinc finger protein 141 [Source:HGNC Symbol;Acc:12926] T 6533 SLC6A6 solute carrier family 6 (neurotransmitter transporter, taurine), member 6 [Source:HGNC Symbol;Acc:11052] P T 1960 EGR3 early growth response 3 [Source:HGNC Symbol;Acc:3240] P T 4329 ALDH6A1 aldehyde dehydrogenase 6 family, member A1 [Source:HGNC Symbol;Acc:7179] zzz999 9201 DCLK1 doublecortin-like kinase 1 [Source:HGNC Symbol;Acc:2700] T 26959 HBP1 HMG-box transcription factor 1 [Source:HGNC Symbol;Acc:23200] zzz999 6430 SRSF5 serine/arginine-rich splicing factor 5 [Source:HGNC Symbol;Acc:10787] zzz999 5890 RAD51L1 RAD51-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:9822] zzz999 10512 SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:HGNC Symbol;Acc:10725] T 28965 SLC27A6 solute carrier family 27 (fatty acid transporter), member 6 [Source:HGNC Symbol;Acc:11000] T 60370 AVPI1 arginine vasopressin-induced 1 [Source:HGNC Symbol;Acc:30898] zzz999 10208 USPL1 ubiquitin specific peptidase like 1 [Source:HGNC Symbol;Acc:20294] zzz999 2669 GEM GTP binding protein overexpressed in skeletal muscle [Source:HGNC Symbol;Acc:4234] T 51362 CDC40 cell division cycle 40 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17350] T 10231 RCAN2 regulator of calcineurin 2 [Source:HGNC Symbol;Acc:3041] P T 9945 GFPT2 glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:4242] zzz999 3902 LAG3 lymphocyte-activation gene 3 [Source:HGNC Symbol;Acc:6476] zzz999 4088 SMAD3 SMAD family member 3 [Source:HGNC Symbol;Acc:6769] P T 4953 ODC1 ornithine decarboxylase 1 [Source:HGNC Symbol;Acc:8109] P T 1272 CNTN1 contactin 1 [Source:HGNC Symbol;Acc:2171] P T 7832 BTG2 BTG family, member 2 [Source:HGNC Symbol;Acc:1131] T 8795 TNFRSF10B tumor necrosis factor receptor superfamily, member 10b [Source:HGNC Symbol;Acc:11905] T 9263 STK17A serine/threonine kinase 17a [Source:HGNC Symbol;Acc:11395] T 4783 NFIL3 nuclear factor, interleukin 3 regulated [Source:HGNC Symbol;Acc:7787] zzz999 6132 RPL8 ribosomal protein L8 [Source:HGNC Symbol;Acc:10368] zzz999 7556 ZNF10 zinc finger protein 10 [Source:HGNC Symbol;Acc:12879] T 8553 BHLHE40 basic helix-loop-helix family, member e40 [Source:HGNC Symbol;Acc:1046] T 6935 ZEB1 zinc finger E-box binding homeobox 1 [Source:HGNC Symbol;Acc:11642] zzz999 2776 GNAQ guanine nucleotide binding protein (G protein), q polypeptide [Source:HGNC Symbol;Acc:4390] zzz999 5864 RAB3A RAB3A, member RAS oncogene family [Source:HGNC Symbol;Acc:9777] zzz999 58494 JAM2 junctional adhesion molecule 2 [Source:HGNC Symbol;Acc:14686] zzz999 3612 IMPA1 inositol(myo)-1(or 4)-monophosphatase 1 [Source:HGNC Symbol;Acc:6050] T 5396 PRRX1 paired related homeobox 1 [Source:HGNC Symbol;Acc:9142] T 93973 ACTR8 ARP8 actin-related protein 8 homolog (yeast) [Source:HGNC Symbol;Acc:14672] T 25976 TIPARP TCDD-inducible poly(ADP-ribose) polymerase [Source:HGNC Symbol;Acc:23696] T 1937 EEF1G eukaryotic translation elongation factor 1 gamma [Source:HGNC Symbol;Acc:3213] zzz999 7057 THBS1 thrombospondin 1 [Source:HGNC Symbol;Acc:11785] T 152006 RNF38 ring finger protein 38 [Source:HGNC Symbol;Acc:18052] P T 8732 RNGTT RNA guanylyltransferase and 5'-phosphatase [Source:HGNC Symbol;Acc:10073] T 10116 FEM1B fem-1 homolog b (C. elegans) [Source:HGNC Symbol;Acc:3649] zzz999 4929 NR4A2 nuclear receptor subfamily 4, group A, member 2 [Source:HGNC Symbol;Acc:7981] P T 157567 ANKRD46 ankyrin repeat domain 46 [Source:HGNC Symbol;Acc:27229] T 2037 EPB41L2 erythrocyte membrane protein band 4.1-like 2 [Source:HGNC Symbol;Acc:3379] P T 1491 CTH cystathionase (cystathionine gamma-lyase) [Source:HGNC Symbol;Acc:2501] P T 55236 UBA6 ubiquitin-like modifier activating enzyme 6 [Source:HGNC Symbol;Acc:25581] T 7402 UTRN utrophin [Source:HGNC Symbol;Acc:12635] T 1213 CLTC clathrin, heavy chain (Hc) [Source:HGNC Symbol;Acc:2092] P T 8496 PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:HGNC Symbol;Acc:9249] T 27316 RBMX RNA binding motif protein, X-linked [Source:HGNC Symbol;Acc:9910] P T 3841 KPNA5 karyopherin alpha 5 (importin alpha 6) [Source:HGNC Symbol;Acc:6398] T 27303 RBMS3 RNA binding motif, single stranded interacting protein 3 [Source:HGNC Symbol;Acc:13427] P T 9781 RNF144A ring finger protein 144A [Source:HGNC Symbol;Acc:20457] T 10659 CELF2 CUGBP, Elav-like family member 2 [Source:HGNC Symbol;Acc:2550] T 287 ANK2 ankyrin 2, neuronal [Source:HGNC Symbol;Acc:493] P T 55031 USP47 ubiquitin specific peptidase 47 [Source:HGNC Symbol;Acc:20076] T 2334 AFF2 AF4/FMR2 family, member 2 [Source:HGNC Symbol;Acc:3776] P T 5021 OXTR oxytocin receptor [Source:HGNC Symbol;Acc:8529] T 1390 CREM cAMP responsive element modulator [Source:HGNC Symbol;Acc:2352] P T 9860 LRIG2 leucine-rich repeats and immunoglobulin-like domains 2 [Source:HGNC Symbol;Acc:20889] T 64084 CLSTN2 calsyntenin 2 [Source:HGNC Symbol;Acc:17448] zzz999 25852 ARMC8 armadillo repeat containing 8 [Source:HGNC Symbol;Acc:24999] P T 23429 RYBP RING1 and YY1 binding protein [Source:HGNC Symbol;Acc:10480] T 5520 PPP2R2A protein phosphatase 2, regulatory subunit B, alpha [Source:HGNC Symbol;Acc:9304] zzz999 23411 SIRT1 sirtuin 1 [Source:HGNC Symbol;Acc:14929] T 2661 GDF9 growth differentiation factor 9 [Source:HGNC Symbol;Acc:4224] T 6542 SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 [Source:HGNC Symbol;Acc:11060] T 5187 PER1 period homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:8845] zzz999 384 ARG2 arginase, type II [Source:HGNC Symbol;Acc:664] zzz999 3646 EIF3E eukaryotic translation initiation factor 3, subunit E [Source:HGNC Symbol;Acc:3277] zzz999 10484 SEC23A Sec23 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:10701] T 3764 KCNJ8 potassium inwardly-rectifying channel, subfamily J, member 8 [Source:HGNC Symbol;Acc:6269] zzz999 11340 EXOSC8 exosome component 8 [Source:HGNC Symbol;Acc:17035] zzz999 10962 MLLT11 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 [Source:HGNC Symbol;Acc:16997] T 2252 FGF7 fibroblast growth factor 7 [Source:HGNC Symbol;Acc:3685] T 5789 PTPRD protein tyrosine phosphatase, receptor type, D [Source:HGNC Symbol;Acc:9668] P T

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.